PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009790153.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 183aa    MW: 20890.5 Da    PI: 8.4653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009790153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-193585155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+ +l+g
  XP_009790153.1 35 PVYRGVRRRR-WGKWVSEIREPRK---KSRIWLGSFSSPEMAARAYDVAAYCLKG 85
                    68*****777.**********843...6************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1014476.54E-6717No hitNo description
PfamPF008474.1E-133585IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-223695IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.5E-313694IPR001471AP2/ERF domain
SMARTSM003801.2E-343699IPR001471AP2/ERF domain
PROSITE profilePS5103223.3143693IPR001471AP2/ERF domain
CDDcd000182.26E-303794No hitNo description
PRINTSPR003671.3E-93748IPR001471AP2/ERF domain
PRINTSPR003671.3E-95975IPR001471AP2/ERF domain
SuperFamilySSF1014476.54E-6122150No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MEKRQPPPPP PPPPSPPVNC RKIDIESGGS STRHPVYRGV RRRRWGKWVS EIREPRKKSR  60
IWLGSFSSPE MAARAYDVAA YCLKGCKTQL NFPDEIERLP RPITSTARDI QAAAAMAANN  120
AIIVKKKNQE NCGSDDFWEE IELPELKDGN DYNLYSEVWQ WSFCNYGRFS SDNNTFINDD  180
GVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-153796666ATERF1
2gcc_A5e-153796666ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009790153.11e-134PREDICTED: ethylene-responsive transcription factor ERF023-like
SwissprotQ1ECI25e-53ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLM1AA361e-70M1AA36_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000181373e-70(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.14e-38ERF family protein